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Data Browser

27 Apr 2008 (Updated 28 Apr 2008)

Code covered by the BSD License

A utility to browse data files that involve one or more channels of data over time.

File Information
Description	A basic data browsing GUI that allows visualization and measurement of data traces. Included are several functions for detection of various kinds of "events" in data with the ability to define your own event types also. Once detected there are functions for analyzing and characterizing events as well as exporting traces and events. Also, the quickly scalable and rescalable axes allow for easy data viewing and manipulation.
MATLAB release	MATLAB 7.5 (R2007b)
Other requirements	Signal Processing and Statistics toolboxes are good to have but not necessary.
Zip File Content
Other Files	Scope/Corel Importer.txt, Scope/Event Characterization/autoCorrelate.m, Scope/Event Characterization/calcBurstProb.m, Scope/Event Characterization/calcSTA.m, Scope/Event Characterization/calcSTO.m, Scope/Event Characterization/crosscorrelateSetup.m, Scope/Event Characterization/intervalHist.m, Scope/Event Characterization/isiCvEvents.m, Scope/Event Characterization/jointDist.m, Scope/Event Characterization/metaCorrEvents.m, Scope/Event Characterization/plotAverageFreq.m, Scope/Event Characterization/plotFreq.m, Scope/Event Characterization/Read Me.txt, Scope/Event Detection/detectCellAttached.m, Scope/Event Detection/detectExtracellular.m, Scope/Event Detection/detectPSP.m, Scope/Event Detection/detectWCAPs.m, Scope/Event Detection/Read Me.txt, Scope/Fitting/fit1Exp.m, Scope/Fitting/fit2Exp.m, Scope/Fitting/fit3Exp.m, Scope/Fitting/fitLine.m, Scope/Fitting/Read Me.txt, Scope/Helper Functions/analysisAxis.m, Scope/Helper Functions/colorSpread.m, Scope/Helper Functions/Contents.m, Scope/Helper Functions/exportSettings.m, Scope/Helper Functions/exportWithAxes.m, Scope/Helper Functions/exportWithScaleBars.m, Scope/Helper Functions/msec2point.m, Scope/Helper Functions/newScale.m, Scope/Helper Functions/prepForPrint.m, Scope/Helper Functions/printWithAxes.m, Scope/Helper Functions/printWithScaleBars.m, Scope/Helper Functions/setAxisLabels.m, Scope/Helper Functions/showEvents.m, Scope/Helper Functions/showFrameMarker.m, Scope/Helper Functions/showStims.m, Scope/Helper Functions/timeControl.m, Scope/matlabCommands.txt, Scope/newScope.m, Scope/Trace Characterization/apHeight.m, Scope/Trace Characterization/apThreshold.m, Scope/Trace Characterization/apWidth.m, Scope/Trace Characterization/apWidthHM.m, Scope/Trace Characterization/fastAHP.m, Scope/Trace Characterization/fastAHPSlope.m, Scope/Trace Characterization/Read Me.txt, Scope/User Manual.rtf, Scope/User-Added Dependencies/burstingProbability.m, Scope/User-Added Dependencies/calcMean.m, Scope/User-Added Dependencies/cell2mat.m, Scope/User-Added Dependencies/characterizePSPs.m, Scope/User-Added Dependencies/crossCorr.m, Scope/User-Added Dependencies/detectPSPs.m, Scope/User-Added Dependencies/detectSpikes.m, Scope/User-Added Dependencies/eventTriggeredAverage.m, Scope/User-Added Dependencies/fcnMin.m, Scope/User-Added Dependencies/findSteps.m, Scope/User-Added Dependencies/findStims.m, Scope/User-Added Dependencies/fitDecayDouble.m, Scope/User-Added Dependencies/fitDecaySingle.m, Scope/User-Added Dependencies/fitDecayTriple.m, Scope/User-Added Dependencies/isiCv.m, Scope/User-Added Dependencies/metaBar.m, Scope/User-Added Dependencies/movingAverage.m, Scope/User-Added Dependencies/MTEO.m, Scope/User-Added Dependencies/normalizeMatrix.m, Scope/User-Added Dependencies/oneSidedDeviation.m, Scope/User-Added Dependencies/overlayPSPs.m, Scope/User-Added Dependencies/pspGui.m, Scope/User-Added Dependencies/whichChannel.m

Tags for This File
Everyone's Tags	align, browse, data exploration, electrophysiology, event
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Tag Activity for this File
Tag	Applied By	Date/Time
data exploration	Phil Larimer	22 Oct 2008 09:59:22
event	Phil Larimer	22 Oct 2008 09:59:22
electrophysiology	Phil Larimer	22 Oct 2008 09:59:22
align	Phil Larimer	22 Oct 2008 09:59:22
browse	Phil Larimer	22 Oct 2008 09:59:22

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